All functions

ModSwiss

Swiss-Prot MS-GF+ data

ModSwissXT

Swiss-Prot X!Tandem data

createPPlotObjects()

Create all the PP plots in one figure for scores from multiple objects

createPPlotScores()

Evaluate assumptions of the Target Decoys Approach for multiple search engines

decoyScoreTable()

Prepare score table for decoys

evalTargetDecoys() evalTargetDecoysPPPlot() evalTargetDecoysHist()

Evaluate assumptions of the Target Decoys approach