TRAjectory Differential Expression analysis for SEQuencing data

tradeSeq provides a flexible method for discovering genes that are differentially expressed along one or multiple lineages, using a variety of tests suited to answer many questions of interest.

Installation

To install the development version in R, run

devtools::install_github("statOmics/tradeSeq")

The installation should only take a few seconds. The dependencies of the package are listed in the DESCRIPTION file of the package.