A `SummarizedExperiment` derived from our case study which builds on the dataset of Tasic et al. It contains the same cells as the data object used in the vignette (see `?Tasic_counts_vignette` for more information). In this SummarizedExperiment, we performed a filtering with `filterByExpr` of edgeR with more stringent than default parameter settings (min.count = 100,min.total.count = 200, large.n = 50, min.prop = 0.9) to reduced the number of retained transcripts. We used this object to create an executable example in the help files of satuRn.

A `SummarizedExperiment` derived from our case study which builds on the dataset of Tasic et al. It contains the same cells as the data object used in the vignette (see `?Tasic_counts_vignette` for more information). In this SummarizedExperiment, we performed a filtering with `filterByExpr` of edgeR with more stringent than default parameter settings (min.count = 100,min.total.count = 200, large.n = 50, min.prop = 0.9) to reduced the number of retained transcripts. We used this object to create an executable example in the help files of satuRn.

data(sumExp_example)

Format

An object of class SummarizedExperiment with 1286 rows and 60 columns.